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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892002.1_cds_XP_016446911.1_41726
CDS Infomation

[gene=LOC107771953] [db_xref=GeneID:107771953] [protein=2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like] [protein_id=XP_016446911.1] [location=complement(join(41653..41820,42131..42316,42492..42631,42913..43024,43241..43340,43448..43605,44262..44444,44541..44675,47177..47404))] [gbkey=CDS]
Sequence

ATGGCTCTGTTCTTCTCAAAATCAAGAAAGTTGATCTGTTTGAAACCCAAGATGGGTTTT
TTGGGTTCACATTCTGTTCATTATCATCATACACTTACATCGCCAAATCTGAGAAACCCA
TTAGGAATTCTTGGTTACGGTTCTGCACACTTCGCGTCTCGCCGTTTCGAATCAACCAAA
GCTGAAACACAGCTGAATCACATGCAGAACATTGACAATAATTCCCAGGTCCTCAATTTC
CCTGGAGGCAAGGTCAAATTCACCTCACATTTGAACTTTATTCCTGAAACAAGGGAGGAG
AGAGTATACTGCTACAGGGTCCTTGACGACGATGGTTATCCCATGACTAGCAATTTCGTA
CAGATTGACAGGGAAGTTGCATTGAAAATGTATACTGATATGGTCACACTTCAAACAATG
GATACAATCTTTTACGAAGCACAAAGACAAGGAAGAATATCTTTCTATGTAACCACACTT
GGAGAAGAAGCTATCAACATTGCATCAGCTGCAGCACTTAGGATGGATGATTTCATCTTT
CCACAGTATAGGGAGCCTGGAGTTCTATTATGGAGAGGGTTTACTATTCAAGAATTTGCC
AATCAGTTGTTTGGAAACAAAGGCGATTATGGAAAAGGAAGGCAGATGCCTATCCATTAT
GGATCTAATAAGCACAATTATATTACAGTTGCATCAACAGTAGCTACTCAGCTTCCACAT
GCTGTTGGTGCTGCCTACTCTCTGAAGATGGACGCGAAAGATGCATGTACAATTGTATAT
TTTGGAGATGGAGGCTCTAGTACGGGAGATTTCCATGCTGCTCTGAACTTTGCTGCGGTC
TTAGACGCGCCTGTTATCTTTTTCTGTCGGAACAATGGTTTTGCAATAAGTACGCCTGTT
TGTGACCAGTTTCGAAGTGATGGTGTTGTTACCAGAGGAGAGGCCTATGGAATTCGTAGT
ATCCGTGTGGACGGTAACGATGCTCTTGCTGTTTTCACCGCTGTCCATGAGGCACGAAAG
ATGGCTGTTAATGAACATAAACCTGTTCTTATTGAGGCCCTTACCTATAGAGCAGGACAT
CATTCAACCTCAGATGACTCAACCAAATATCGTCCAGCTAACGAAATCGAATGGTGGAGA
AGAGAAAGAGACCCTGTAACTAGATTCAGGAAATGGATTGAAAGACGAGGCTGCTGGAGT
TCTGAGGCTGAGTCTGAACTTCGCAGTAATCTCAGGAAGCAGGTATTGGAAGCCATTCAA
GTTGCAGAAAGAGCGGAGAAGCTTCCAATTAAGGATGTATTTACAGATGTATATGATGTT
CCTCCAGCAAACCTCCAAGAACAGGAAACATTTATTCGTGAAACAATCAGAAGACATCCG
CAGGATTATCCTACTGATGTTCCTATCTAG

Peptide Sequence

PEP ID

XP_016446911.1
PEP Infomation

PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MALFFSKSRKLICLKPKMGFLGSHSVHYHHTLTSPNLRNPLGILGYGSAHFASRRFESTK
AETQLNHMQNIDNNSQVLNFPGGKVKFTSHLNFIPETREERVYCYRVLDDDGYPMTSNFV
QIDREVALKMYTDMVTLQTMDTIFYEAQRQGRISFYVTTLGEEAINIASAAALRMDDFIF
PQYREPGVLLWRGFTIQEFANQLFGNKGDYGKGRQMPIHYGSNKHNYITVASTVATQLPH
AVGAAYSLKMDAKDACTIVYFGDGGSSTGDFHAALNFAAVLDAPVIFFCRNNGFAISTPV
CDQFRSDGVVTRGEAYGIRSIRVDGNDALAVFTAVHEARKMAVNEHKPVLIEALTYRAGH
HSTSDDSTKYRPANEIEWWRRERDPVTRFRKWIERRGCWSSEAESELRSNLRKQVLEAIQ
VAERAEKLPIKDVFTDVYDVPPANLQEQETFIRETIRRHPQDYPTDVPI

Transcript Sequence

Gene sequence data has not been registered.